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Chemical Bonding and Structure

Introduction

Why Atoms Bond

Atoms interact to achieve lower potential energy. This is a stability argument. An isolated atom is A high-energy state; when atoms rearrange their electrons to form bonds, the resulting configuration Sits in an energy well. The depth of that well is the bond enthalpy.

There are three broad categories of chemical bonding:

Bond TypeMechanismTypical ParticipantsDirectionality
IonicElectron transferMetal + non-metalNon-directional
CovalentElectron sharingNon-metal + non-metalDirectional
MetallicDelocalised electron poolMetal atomsNon-directional

Beyond intramolecular bonds, intermolecular forces govern how molecules interact with each Other. These are weaker by one to two orders of magnitude but are critical for determining physical Properties such as melting point, boiling point, and solubility.

Definition. The bond enthalpy is the average enthalpy change when one mole of a specified Type of bond is broken in the gaseous phase, measured in kJ/mol.


Ionic Bonding

Mechanism

Ionic bonding results from the electrostatic attraction between cations and anions formed by Complete electron transfer from a metal atom to a non-metal atom.

The driving force is the attainment of noble gas electron configurations:

Na(s)Na+(g)+eΔHat=+108kJ/mol\mathrm{Na}(s) \to \mathrm{Na}^+(g) + e^- \quad \Delta H_{\mathrm{at}}^\circ = +108\mathrm{ kJ/mol} 12Cl2(g)Cl(g)ΔHat=+122kJ/mol\frac{1}{2}\mathrm{Cl}_2(g) \to \mathrm{Cl}(g) \quad \Delta H_{\mathrm{at}}^\circ = +122\mathrm{ kJ/mol} Cl(g)+eCl(g)ΔHEA=349kJ/mol\mathrm{Cl}(g) + e^- \to \mathrm{Cl}^-(g) \quad \Delta H_{\mathrm{EA}} = -349\mathrm{ kJ/mol} Na+(g)+Cl(g)NaCl(s)ΔHLE=787kJ/mol\mathrm{Na}^+(g) + \mathrm{Cl}^-(g) \to \mathrm{NaCl}(s) \quad \Delta H_{\mathrm{LE}} = -787\mathrm{ kJ/mol}

Definition. Lattice energy (ΔHLE\Delta H_{\mathrm{LE}}) is the enthalpy change when one mole Of an ionic solid is formed from its gaseous ions. It is always exothermic. A more negative lattice Energy indicates a stronger ionic bond.

Factors Affecting Lattice Energy

The Born-Lande equation captures the key variables:

ΔHLEz+zr++r\Delta H_{\mathrm{LE}} \propto -\frac{|z^+| \cdot |z^-|}{r_+ + r_-}
FactorEffect on Lattice EnergyExample
Higher ion chargeMore negative (stronger)MgO>NaCl\mathrm{MgO} \gt \mathrm{NaCl}
Smaller ion radiiMore negative (stronger)LiF>NaF\mathrm{LiF} \gt \mathrm{NaF}
Compoundz⁺z⁻r⁺ + r⁻ (pm)Lattice Energy (kJ/mol)
NaCl+1-1276-787
MgO+2-2210-3795
LiF+1-1201-1036
CaO+2-2241-3414

The Born-Haber Cycle

The Born-Haber cycle is an application of Hess”s law that links lattice energy to thermodynamic data You can measure experimentally.

Definition. The Born-Haber cycle is a thermochemical cycle that decomposes the formation of An ionic solid into a series of sequential steps, allowing calculation of lattice energy from Measurable quantities.

For NaCl:

ΔHf=ΔHat(Na)+12ΔHat(Cl2)+IE1(Na)+EA1(Cl)+ΔHLE\Delta H_f^\circ = \Delta H_{\mathrm{at}}^\circ(\mathrm{Na}) + \frac{1}{2}\Delta H_{\mathrm{at}}^\circ(\mathrm{Cl}_2) + \mathrm{IE}_1(\mathrm{Na}) + \mathrm{EA}_1(\mathrm{Cl}) + \Delta H_{\mathrm{LE}}

Rearranging for lattice energy:

ΔHLE=ΔHfΔHat(Na)12ΔHat(Cl2)IE1(Na)EA1(Cl)\Delta H_{\mathrm{LE}} = \Delta H_f^\circ - \Delta H_{\mathrm{at}}^\circ(\mathrm{Na}) - \frac{1}{2}\Delta H_{\mathrm{at}}^\circ(\mathrm{Cl}_2) - \mathrm{IE}_1(\mathrm{Na}) - \mathrm{EA}_1(\mathrm{Cl})

Substituting values:

ΔHLE=411108122496(349)=788kJ/mol\Delta H_{\mathrm{LE}} = -411 - 108 - 122 - 496 - (-349) = -788\mathrm{ kJ/mol}

IB Exam Tip

When constructing a Born-Haber cycle diagram, every arrow must be labelled with the correct enthalpy Term. The most common error is confusing ΔHat\Delta H_{\mathrm{at}}^\circ (atomisation of the solid Element) with ΔHsub\Delta H_{\mathrm{sub}} (sublimation) — for metals they are the same quantity, but The terminology matters.

Physical Properties of Ionic Compounds

PropertyExplanation
High melting/boiling pointStrong electrostatic forces in the lattice require large energy input to break
BrittleShifting one layer of ions places like charges adjacent, causing repulsion and fracture
Conduct electricity when molten or aqueousIons are free to move and carry charge; in the solid state ions are fixed in the lattice
Soluble in polar solventsPolar water molecules can surround and stabilise individual ions (solvation/hydration)

Solubility Rules

Ion GroupSolubility Pattern
Group 1 cations, NH4+_4^+Always soluble
Nitrates (NO3_3^-)Always soluble
Acetates (CH3_3COO^-)Always soluble
Chlorides, bromides, iodidesSoluble except with Ag+^+Pb2+^{2+}Hg22+_2^{2+}
Sulfates (SO42_4^{2-})Soluble except with Ba2+^{2+}Pb2+^{2+}Ca2+^{2+} (slightly)
Hydroxides (OH^-)Insoluble except with Group 1, Ba2+^{2+}Ca2+^{2+} (slightly)
Carbonates (CO32_3^{2-})Insoluble except with Group 1, NH4+_4^+
Phosphates (PO43_4^{3-})Insoluble except with Group 1, NH4+_4^+

Covalent Bonding

Lewis Structures

Lewis structures represent valence electrons as dots and show bonding pairs as lines (each line = 2 Shared electrons).

Rules for drawing Lewis structures:

  1. Count the total number of valence electrons from all atoms.
  2. Identify the central atom (lowest electronegativity, excluding H which is always terminal).
  3. Connect all atoms with single bonds (use 2 electrons per bond).
  4. Complete the octets of terminal atoms first.
  5. Place any remaining electrons on the central atom.
  6. If the central atom lacks an octet, form double or triple bonds by converting lone pairs on terminal atoms into bonding pairs.

IB Exam Tip

The threshold of 1.7 is a guideline, not an absolute boundary. For example, H-Cl has ΔEN=0.9\Delta\mathrm{EN} = 0.9 (polar covalent), but Al-Cl has ΔEN=1.55\Delta\mathrm{EN} = 1.55 (still Considered covalent in AlCl3_3A molecular compound). Always consider the compound’s actual Properties.

Dipole Moments

A bond dipole is represented by an arrow pointing towards the more electronegative atom, with a Cross at the less electronegative end.

The molecular dipole moment (μ\mu) is the vector sum of all individual bond dipoles. A molecule Can have polar bonds but be non-polar overall if the bond dipoles cancel by symmetry.

μnet=μi\vec{\mu}_{\mathrm{net}} = \sum \vec{\mu}_i
MoleculeBond DipolesMolecular DipoleReason
CO2_2PresentZeroLinear geometry, dipoles cancel
H2_2OPresentPresentBent geometry, dipoles do not cancel
CCl4_4PresentZeroTetrahedral symmetry, cancellation
CHCl3_3PresentPresentAsymmetric substitution

Metallic Bonding

The Sea of Electrons Model

In a metallic lattice, metal atoms release their valence electrons into a delocalised “sea” or “cloud” of electrons. The resulting cations are held in a regular lattice by electrostatic Attraction to this delocalised electron pool.

This model explains the key properties of metals:

PropertyExplanation
High melting pointsStrong metallic bonding throughout the lattice
Electrical conductivityDelocalised electrons are free to move under an applied potential
Malleability and ductilityLayers of cations can slide past each other without breaking metallic bonds
Thermal conductivityDelocalised electrons transfer kinetic energy efficiently
Lustrous appearanceDelocalised electrons absorb and re-emit photons across the visible spectrum
Alloy formationAtoms of different sizes distort the lattice, preventing layer sliding

Factors Affecting Metallic Bond Strength

FactorEffectExample
Number of valence electronsMore delocalised electrons = stronger bondAl >\gt Na
Nuclear chargeHigher charge = stronger attractionCa >\gt K
Ionic radiusSmaller radius = stronger bondMg >\gt Ca
MetalMelting Point (°\degreeC)Reason
Na981 valence electron, large radius
Mg6502 valence electrons
Al6603 valence electrons
W3422Many valence electrons, small radius

Alloys

Definition. An alloy is a homogeneous mixture of two or more elements, at least one of which Is a metal.

Alloy TypeDescriptionEffect on Properties
SubstitutionalAtoms of similar size replace host atoms in the latticeDistorts lattice, increases hardness, reduces malleability
InterstitialSmall atoms (C, N) fit into gaps in the latticeBlocks dislocation movement, increases hardness

Steel is an interstitial alloy of iron with carbon. Brass is a substitutional alloy of copper and Zinc.


Intermolecular Forces

Intermolecular forces (IMFs) are the attractions between molecules. They are much weaker than Intramolecular bonds ( 2—50 kJ/mol vs 150—1000 kJ/mol for covalent bonds).

Types of Intermolecular Forces

IMF TypeStrength (kJ/mol)MechanismPresent In
London dispersion0.05 — 40Temporary dipole from electron cloud fluctuationAll molecules
Dipole-dipole5 — 20Permanent dipole-dipole attractionPolar molecules
Hydrogen bonding10 — 40H bonded to N, O, or F attracted to lone pairMolecules with N-H, O-H, or F-H
Ion-dipole10 — 50Ion interacts with molecular dipoleIonic compounds in polar solvents

London Dispersion Forces

Definition. London dispersion forces (also called induced dipole-induced dipole forces or Van der Waals forces) arise from temporary, instantaneous dipoles created by the uneven distribution Of electrons at any given moment.

Factors affecting London dispersion force strength:

  1. Number of electrons: More electrons = larger electron cloud = stronger temporary dipoles.
  2. Molecular shape (surface area): Larger contact area between molecules = stronger forces.
MoleculeElectronsBoiling Point (°\degreeC)Reason
CH4_410-161Few electrons, small surface
C2_2H6_618-89More electrons
C4_4H_{10}50-1Many more electrons

Dipole-Dipole Forces

Polar molecules have a permanent separation of charge. The positive end of one molecule is attracted To the negative end of another.

Definition. Dipole-dipole forces are the electrostatic attractions between the positive end Of one polar molecule and the negative end of another.

Hydrogen Bonding

Definition. Hydrogen bonding is a particularly strong dipole-dipole interaction that occurs When a hydrogen atom is covalently bonded to a highly electronegative atom (N, O, or F) and is Simultaneously attracted to a lone pair on another N, O, or F atom.

Requirements:

  • A hydrogen atom bonded to N, O, or F.
  • A lone pair on an N, O, or F atom on a neighbouring molecule.
SubstanceBoiling Point (°\degreeC)Why so high?
H2_2O100Extensive hydrogen bonding network
HF20Strong H-bonds (1 per molecule)
NH3_3-33Fewer H-bonds per molecule
H2_2S-60No hydrogen bonding (S not EN enough)
CH4_4-161Only London dispersion forces

IB Exam Tip

Water has an anomalously high boiling point compared to H2_2S, H2_2Se, and H2_2Te. The expected Trend (boiling point increases down the group due to increasing electrons) is overridden by hydrogen Bonding in water. This is a classic IB exam question.

Ion-Dipole Forces

When an ionic compound dissolves in a polar solvent like water, the ions interact with the molecular Dipoles. This is the force responsible for the solvation of ions.

Na+δO(H2O)Clδ+H(H2O)\mathrm{Na}^+ \cdots \delta^-\mathrm{O}(\mathrm{H}_2\mathrm{O}) \qquad \mathrm{Cl}^- \cdots \delta^+\mathrm{H}(\mathrm{H}_2\mathrm{O})

For comparing boiling points of similar molecules:

  1. Check for hydrogen bonding first (dominant IMF).
  2. Among non-H-bonding molecules, compare dipole-dipole vs London dispersion.
  3. For non-polar molecules, boiling point increases with molar mass (more electrons = stronger London forces).
  4. For isomers, the more branched isomer has a lower boiling point (smaller surface area).

Effect of IMF on Physical Properties

PropertyStrong IMFWeak IMF
Melting pointHighLow
Boiling pointHighLow
Vapour pressureLowHigh
ViscosityHighLow
Surface tensionHighLow
VolatilityLowHigh

Molecular Geometry

VSEPR Theory

Definition. Valence Shell Electron Pair Repulsion (VSEPR) theory states that electron pairs (bonding and non-bonding) around a central atom will arrange themselves to minimise repulsion, Adopting geometries that maximise the angles between them.

The repulsion order is:

lonepairlonepair>lonepairbondpair>bondpairbondpair\mathrm{lone pair--lone pair} \gt \mathrm{lone pair--bond pair} \gt \mathrm{bond pair--bond pair}

This is because lone pairs are held by only one nucleus and occupy more space, while bonding pairs Are constrained between two nuclei.

AXnEm Notation

  • A = central atom
  • X = bonded atom (bonding pair)
  • n = number of bonding pairs
  • E = lone pair on the central atom
  • m = number of lone pairs

Electron Domain Geometries

The base geometries depend on the total number of electron domains (n+mn + m):

Total DomainsBase GeometryBond Angles
2Linear180°\degree
3Trigonal planar120°\degree
4Tetrahedral109.5°\degree
5Trigonal bipyramidal90°\degree120°\degree
6Octahedral90°\degree

Molecular Shapes and Examples

2 Electron Domains

NotationShapeBond AngleExample
AX2_2Linear180°\degreeCO2_2BeCl2_2

3 Electron Domains

NotationShapeBond AngleExample
AX3_3Trigonal planar120°\degreeBF3_3AlCl3_3
AX2_2EBent/V-shaped<120°\lt 120\degreeSO2_2O3_3

IB Exam Tip

A common exam question asks whether a molecule like CHCl3_3 or CH2_2Cl2_2 is polar. Even though C-H and C-Cl bonds have different polarities, the key is whether the vector sum of all bond dipoles Equals zero. CHCl3_3 is polar (no symmetry), but CCl4_4 is non-polar (perfect tetrahedral Symmetry). CH2_2Cl2_2 is polar because the two C-Cl dipoles and two C-H dipoles do not cancel.


Hybridization

SL Content: sp, sp2^2Sp3^3

Definition. Hybridization is the mathematical mixing of atomic orbitals on a central atom to Form a new set of equivalent hybrid orbitals that match the observed geometry.

HybridizationAtomic Orbitals MixedNumber of Hybrid OrbitalsGeometryBond Angle
sp1s + 1p2Linear180°\degree
sp2^21s + 2p3Trigonal planar120°\degree
sp3^31s + 3p4Tetrahedral109.5°\degree

How to Determine Hybridization

Count the number of electron domains (bonding pairs + lone pairs) around the central atom:

  • 2 domains = sp
  • 3 domains = sp2^2
  • 4 domains = sp3^3
  • 5 domains = sp3^3D
  • 6 domains = sp3^3D2^2

Examples

MoleculeCentral AtomDomainsHybridizationGeometry
BeCl2_2Be2spLinear
BF3_3B3sp2^2Trigonal planar
CH4_4C4sp3^3Tetrahedral
NH3_3N4sp3^3Trigonal pyramidal
H2_2OO4sp3^3Bent

Hybridization and Multiple Bonds

In a double bond, one bond is sigma (hybrid orbital overlap) and one is pi (unhybridized p-orbital Overlap). The hybridization of the central atom is determined by the total number of domains (not Bonds).

MoleculeDomains on CHybridizationSigma BondsPi Bonds
C2_2H4_4 (ethene)3sp2^251
C2_2H2_2 (ethyne)2sp32
CO2_22sp22
HCN2sp22

Resonance

Delocalization

Definition. Resonance occurs when a molecule or ion can be represented by two or more valid Lewis structures that differ only in the positions of electrons (not atoms). The actual structure is A hybrid — an average of all resonance forms.

Resonance stabilises a molecule. The more resonance structures, the greater the delocalisation Energy (lower energy, more stable).

Ozone (O3_3)

Ozone has two equivalent resonance structures:

\chemfigO=OO+\chemfigOO+=O\chemfig{O=O^{-}-O^{+}} \longleftrightarrow \chemfig{^{-}O-O^{+}=O}

The actual O-O bond order is 1.5, and the bond length is intermediate between a single and double Bond (127.8 pm vs 121 pm for O=O and 148 pm for O-O).

Carbonate Ion (CO32_3^{2-})

Three equivalent resonance structures, each with one C=O double bond and two C-O single bonds. The Actual bond order is 1.33 for each C-O bond.

Bondlengthmeasured:136pm(between123pmforC=Oand143pmforCO)\mathrm{Bond length measured: } 136\mathrm{ pm (between } 123\mathrm{ pm for C=O and } 143\mathrm{ pm for C-O)}

Benzene (C6_6H6_6)

Benzene has two Kekule structures with alternating single and double bonds. The actual structure Has:

  • Six equivalent C-C bonds with bond order 1.5
  • All bond lengths identical: 140 pm (between 134 pm for C=C and 154 pm for C-C)
  • A delocalised pi electron system above and below the ring
  • Planar geometry (sp2^2 hybridised carbons)

IB Exam Tip

The enthalpy of hydrogenation of benzene (-208 kJ/mol, for 3 moles of H2_2) is less exothermic than Expected from three isolated C=C bonds (-360 kJ/mol). The difference (152 kJ/mol) is the resonance Energy (or delocalisation energy), which is a direct measure of the extra stability gained from Electron delocalisation.


HL-Only Extensions

Formal Charge

Definition. Formal charge is the charge assigned to an atom in a Lewis structure, calculated By comparing the number of valence electrons in the free atom with the number assigned to it in the Structure.

Formalcharge=VNBNL2\mathrm{Formal charge} = V - N_B - \frac{N_L}{2}

Where:

  • VV = number of valence electrons in the free atom
  • NBN_B = number of bonding electrons (shared) assigned to the atom
  • NLN_L = number of lone pair (non-bonding) electrons on the atom

Equivalently:

Formalcharge=V(numberofbonds)(numberoflonepairelectrons)\mathrm{Formal charge} = V - (\mathrm{number of bonds}) - (\mathrm{number of lone pair electrons})

Rules for choosing the best Lewis structure:

  1. The best structure minimises formal charges.
  2. Negative formal charges should reside on the most electronegative atoms.
  3. Like charges should not be adjacent.
  4. Formal charges closest to zero are preferred.

Example: SO42_4^{2-}

Sulfur has 6 valence electrons. With four single bonds to oxygen and no lone pairs:

FC(S)=640=+2\mathrm{FC}(\mathrm{S}) = 6 - 4 - 0 = +2

Each singly-bonded oxygen: FC=616=1\mathrm{FC} = 6 - 1 - 6 = -1

Total charge: +2+4(1)=2+2 + 4(-1) = -2. This is valid but has large formal charges. Adding double bonds Reduces the formal charges.

With two S=O double bonds:

FC(S)=660=0\mathrm{FC}(\mathrm{S}) = 6 - 6 - 0 = 0

The two double-bonded oxygens: FC=624=0\mathrm{FC} = 6 - 2 - 4 = 0

The two single-bonded oxygens: FC=616=1\mathrm{FC} = 6 - 1 - 6 = -1

Total charge: 0+0+2(1)=20 + 0 + 2(-1) = -2. This is the preferred structure.

sp3^3D and sp3^3D2^2 Hybridization (HL)

These hybridizations involve d-orbitals and are used for expanded octet species:

HybridizationOrbitals MixedDomainsGeometryBond Angles
sp3^3D1s + 3p + 1d5Trigonal bipyramidal90°\degree120°\degree
sp3^3D2^21s + 3p + 2d6Octahedral90°\degree
MoleculeCentral AtomDomainsHybridization
PCl5_5P5sp3^3D
SF4_4S5sp3^3D
ClF3_3Cl5sp3^3D
SF6_6S6sp3^3D2^2
BrF5_5Br6sp3^3D2^2
XeF4_4Xe6sp3^3D2^2

Molecular Orbital Theory (HL)

Definition. Molecular orbital (MO) theory describes bonding in terms of the combination of Atomic orbitals to form molecular orbitals that belong to the entire molecule.

Key principles:

  1. Atomic orbitals combine to form molecular orbitals.
  2. The number of molecular orbitals equals the number of atomic orbitals combined.
  3. Bonding orbitals are lower in energy than the parent atomic orbitals.
  4. Antibonding orbitals are higher in energy than the parent atomic orbitals.

MO Diagrams for Homonuclear Diatomic Molecules

For elements in period 2:

  • Li2_2 through N2_2: σ2s<σ2s<π2px=π2py<σ2pz<π2px=π2py<σ2pz\sigma_{2s} \lt \sigma^*_{2s} \lt \pi_{2p_x} = \pi_{2p_y} \lt \sigma_{2p_z} \lt \pi^*_{2p_x} = \pi^*_{2p_y} \lt \sigma^*_{2p_z}
  • O2_2 through Ne2_2: σ2s<σ2s<σ2pz<π2px=π2py<π2px=π2py<σ2pz\sigma_{2s} \lt \sigma^*_{2s} \lt \sigma_{2p_z} \lt \pi_{2p_x} = \pi_{2p_y} \lt \pi^*_{2p_x} = \pi^*_{2p_y} \lt \sigma^*_{2p_z}

The s-p mixing in Li2_2 through N2_2 pushes the σ2pz\sigma_{2p_z} above the π2p\pi_{2p} orbitals. For O2_2 and F2_2The energy gap is large enough that s-p mixing is negligible.

Bond Order from MO Theory

Bondorder=12(NbondingNantibonding)\mathrm{Bond order} = \frac{1}{2}(N_{\mathrm{bonding}} - N_{\mathrm{antibonding}})
MoleculeBonding ElectronsAntibonding ElectronsBond OrderStability
H2_2201Stable
He2_2220Not stable
Li2_2201Stable
Be2_2220Not stable
B2_2421Stable
C2_2622Stable
N2_2823Very stable
O2_2842Stable
F2_2861Stable
Ne2_2880Not stable

IB Exam Tip

MO theory explains why O2_2 is paramagnetic (has unpaired electrons in the π\pi^* orbitals). Lewis Structures cannot predict this. This is a classic HL exam question.

Paramagnetism vs Diamagnetism

  • Paramagnetic: Contains unpaired electrons. Attracted to a magnetic field. Examples: O2_2 B2_2.
  • Diamagnetic: All electrons are paired. Repelled by a magnetic field. Examples: N2_2F2_2 C2_2.

Band Theory of Metals and Semiconductors (HL)

When many metal atoms come together in a lattice, their atomic orbitals combine to form bands — A huge number of closely spaced molecular orbitals.

Definition. The valence band is the highest energy band that is occupied by electrons at 0 K. The conduction band is the next higher band, which is empty at 0 K.

Classification by Band Gap

Material TypeBand GapConductivity at 0 KExample
MetalOverlappingConductsCu, Na
SemiconductorSmall (0.1 — 3 eV)Does not conduct (at 0 K)Si, Ge
InsulatorLarge (>3\gt 3 eV)Does not conductDiamond

In metals, the valence and conduction bands overlap, so electrons are always available for Conduction. In semiconductors, thermal energy can promote electrons across the band gap, creating Charge carriers.

Intrinsic vs Extrinsic Semiconductors

Intrinsic semiconductors are pure materials (e.g., pure Si) where conductivity increases with Temperature as more electrons are promoted across the band gap.

Extrinsic semiconductors have been doped with impurities:

Doping TypeDopantEffectCarrier Type
n-typeGroup 15 (P)Extra electron enters conduction bandElectron
p-typeGroup 13 (B)Electron vacancy (hole) in valence bandHole (positive)